FastQCFastQC Report
Tue 22 Apr 2025
CR1458_17111FL-70-01-19_S19_L007_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1458_17111FL-70-01-19_S19_L007_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22077900
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCG403070.18256718256718257No Hit
AGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAG365460.16553204788498907No Hit
AGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCA357760.162044397338515No Hit
AGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAG335410.1519211519211519No Hit
AGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCC309660.14025790496378732No Hit
AGGGGGTTGTTTGATCCCGTTTCGTGCAAGAATAGGAGGTGGAGTGCTGC284360.12879848173965822No Hit
AGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTACAGAAC278130.1259766553884201No Hit
TGCCAGCCACCATGAATATTGCACGGTACCATAAATACTTGACCACCTGT278070.12594947889065536No Hit
AGGGAGAGCTGGGTTGTTTGGGTTGTGGCTCAGTGTCAGTTCGAGATAAT261770.11856653033123622No Hit
AGGGCAAGGACGCCTCCTAGTTTGTTAGGGACGGATCGGAGAATTGTGTA261010.11822229469288294No Hit
AGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTCCGTGGAGTGT255540.1157447039799981No Hit
AGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGGGGAACGTG252380.11431340843105549No Hit
AGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAA247540.11212117094470035No Hit
AGGGCGAAGGGGCCTGCGGCGTATTCGATGTTGAAGCCTGAGACTAGTTC245860.11136022900728783No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG242970.11005122769828651No Hit
AGGGATGGGAGGGCGATGAGGACTAGGATGATGGCGGGCAGGATAGTTCA231070.10466122230828112No Hit
AGCAGCAGCAGGCAAATCAGCCCAATTAGGTCTCCACCCCTGACTCCCCT230370.10434416316769259No Hit
AGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCC225590.10217910217910219No Hit
AGGGCTGCAATAATGAAGGGCAAGATGAAGTGAAAGGTAAAGAATCGTGT224940.10188469011998423No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)