FastQCFastQC Report
Tue 22 Apr 2025
CR1444_17111FL-70-01-05_S5_L007_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1444_17111FL-70-01-05_S5_L007_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23882871
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCG400830.1678315810523785No Hit
TGCCAGCCACCATGAATATTGCACGGTACCATAAATACTTGACCACCTGT393680.1648378036292203No Hit
AGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAG352580.1476288173226745No Hit
AGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAG349130.1461842673772345No Hit
AGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCA345390.14461829149435174No Hit
AGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCC331850.13894895634616122No Hit
AGGGGGTTGTTTGATCCCGTTTCGTGCAAGAATAGGAGGTGGAGTGCTGC326230.13659580542054595No Hit
AGGGCAAGGACGCCTCCTAGTTTGTTAGGGACGGATCGGAGAATTGTGTA281180.11773291410400366No Hit
AGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTACAGAAC279450.11700854558063811No Hit
AGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGGGGAACGTG270810.11339089006510147No Hit
AGGGAGAGCTGGGTTGTTTGGGTTGTGGCTCAGTGTCAGTTCGAGATAAT259550.10867621401128869No Hit
AGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTCCGTGGAGTGT245430.1027640269882126No Hit
AGGGCGAAGGGGCCTGCGGCGTATTCGATGTTGAAGCCTGAGACTAGTTC244060.10219039411132774No Hit
AGGGCTGCAATAATGAAGGGCAAGATGAAGTGAAAGGTAAAGAATCGTGT241250.1010138186485201No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)