FastQCFastQC Report
Tue 22 Apr 2025
CR1442_17111FL-70-01-03_S3_L007_trimmed_2P.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1442_17111FL-70-01-03_S3_L007_trimmed_2P.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16667315
Sequences flagged as poor quality0
Sequence length36-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG672020.4031963156633207No Hit
TGCCAGCCACCATGAATATTGCACGGTACCATAAATACTTGACCACCTGT224210.13452076714215816No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)