FastQCFastQC Report
Tue 26 Nov 2024
CR1326_17111FL-61-01-47_S141_L006_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1326_17111FL-61-01-47_S141_L006_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15098777
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGGTCGCTGTTCAATACATCGGACCGCGATACGACTCGTTCGTCGGCC1926151.275699349689051No Hit
CAAGGTCGCTGTTCAATACATCGGACCGCGCGTAATGCGCGACGTTAGCC1664151.1021753616203485No Hit
AGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTT1571911.0410843209353977No Hit
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCG1266200.8386109682923325No Hit
ATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCG743760.4925961884197641No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG285720.18923386973660183No Hit
ACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCGTA282710.18724033078970567No Hit
ATGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAAT252870.16747714069821681No Hit
ATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACCCTATA234550.15534370763936708No Hit
GCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTC232180.1537740440831731No Hit
TGTGTTCGACCCTATACGCGGCCGCCGAAACGCGTATCGCGCGCATAATA200430.13274585087255744No Hit
TACGCGGCCGCCGAAACGCGTATCGCGCGCATAATAGCTCAATTGGTCGT197590.13086490382631652No Hit
ACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTAT160790.10649206886094152No Hit
CAAGGTCGCTGTTCAATACATCGGATATCGCGCGAAACGACCGTTCGGCC160290.10616091621195543No Hit
ATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGC159600.10570392555635467No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)