FastQCFastQC Report
Mon 25 Nov 2024
CR1295_17111FL-61-01-16_S110_L006_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1295_17111FL-61-01-16_S110_L006_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17775221
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCA336400.18925221801743No Hit
AGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAG321780.18102728511786154No Hit
AGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCG314630.17700483161362662No Hit
AGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAG308670.17365184939191475No Hit
AGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCC290360.16335099293561525No Hit
AGGGCGAAGGGGCCTGCGGCGTATTCGATGTTGAAGCCTGAGACTAGTTC232780.13095758415605635No Hit
AGGGCAAGGACGCCTCCTAGTTTGTTAGGGACGGATCGGAGAATTGTGTA232250.13065941627392424No Hit
AGGGGGTTGTTTGATCCCGTTTCGTGCAAGAATAGGAGGTGGAGTGCTGC231640.13031624191901747No Hit
AGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTCCGTGGAGTGT217140.12215881872861102No Hit
AGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGGGGAACGTG210810.11859768157031635No Hit
AGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAA207570.11677491942294276No Hit
AGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTACAGAAC207120.1165217580135853No Hit
TGCCAGCCACCATGAATATTGCACGGTACCATAAATACTTGACCACCTGT205810.11578477702190032No Hit
AGGGAGAGCTGGGTTGTTTGGGTTGTGGCTCAGTGTCAGTTCGAGATAAT202690.11402952458368873No Hit
AGGGACGGATCGGAGAATTGTGTAGGCGAATAGGAAATATCATTCGGGCT193780.10901692867841135No Hit
AGGGATGGGAGGGCGATGAGGACTAGGATGATGGCGGGCAGGATAGTTCA192230.1081449282684024No Hit
AGGGCTGCAATAATGAAGGGCAAGATGAAGTGAAAGGTAAAGAATCGTGT189200.10644030811206229No Hit
AGGCCTCGCCCGATGTGTAGGAAGAGGCAGATAAAGAATATTGAGGCGCC184090.1035655196635811No Hit
AGGCCTCCTCCTAGCAGCAGCAGGCAAATCAGCCCAATTAGGTCTCCACC182960.10292980323563909No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)