FastQCFastQC Report
Mon 25 Nov 2024
CR1283_17111FL-61-01-04_S98_L006_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1283_17111FL-61-01-04_S98_L006_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9639067
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCG201680.20923186860305046No Hit
AGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAG177330.18397008756137911No Hit
TGCCAGCCACCATGAATATTGCACGGTACCATAAATACTTGACCACCTGT164800.17097090413418645No Hit
AGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCC155980.16182064093962623No Hit
AGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCA152980.15870830651970777No Hit
AGGGGTCCCTTGACCACCATCCTCCGTGAAATCAATATCCCGCACAAGAG151620.1572973815826781No Hit
AGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAA128390.13319753872444295No Hit
AGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGGGGAACGTG128210.13301079865924784No Hit
AGGGCTCAGAGCACTGCAGCAGATCATTTCATATTGCTTCCGTGGAGTGT116020.12036434646631256No Hit
AGGCGACCCAGACAATTATACCCTAGCCAACCCCTTAAACACCCCTCCCC108370.11242789369552053No Hit
AGGGGGTTGTTTGATCCCGTTTCGTGCAAGAATAGGAGGTGGAGTGCTGC108310.11236564700712215No Hit
AGGGCAAGGACGCCTCCTAGTTTGTTAGGGACGGATCGGAGAATTGTGTA104630.10854785011868888No Hit
AGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTACAGAAC103470.10734441414298708No Hit
AGGGCTGCAATAATGAAGGGCAAGATGAAGTGAAAGGTAAAGAATCGTGT101480.1052798989777745No Hit
AGGAATCACCTCCCATTCCGATAAAATCACCTTCCACCCTTACTACACAA101410.10520727784130975No Hit
AGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTGCACTTGGAC100780.10455368761312687No Hit
AGGGCGAAGGGGCCTGCGGCGTATTCGATGTTGAAGCCTGAGACTAGTTC97630.10128573647221252No Hit
AGGCCTCGCCCGATGTGTAGGAAGAGGCAGATAAAGAATATTGAGGCGCC97460.1011093708550838No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)