FastQCFastQC Report
Fri 7 Jun 2024
CR1133_17111FL-54-01-18_S135_L006_R2_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCR1133_17111FL-54-01-18_S135_L006_R2_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10977288
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1606521.46349444416508No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTATCAGTGTAGATC125600.114418060271353Illumina Single End PCR Primer 1 (96% over 33bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)